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Table 3 Occurrence and patterns of antibiotic resistance molecular markers detected by RT-PCR among Salmonella enterica isolates from poultry tissue (P) and environmental samples (E)

From: Antimicrobial drug resistant non-typhoidal Salmonella enterica in commercial poultry value chain in Chitwan, Nepal

Genetic marker

Environment samples

N = 31

Poultry tissue samples

N = 126

Isolates with only this marker

tetA

25 (81%)

106 (84%)

12 (39%, E); 49 (39%, P)

QnrS

11 (35%)

53 (42%)

0 (E); 1 (0.1%, P)

mefA

3 (10%)

10 (8%)

0(E); 2 (0.2%, P)

VIM-1

0

1 (0.1%)

–

Both tetAandQnrS

10 (32%)

48 (38%)

 

Both tetAand mefA

2 (6%)

4 (0.3%)

 

Both tetAand VIM-1

0

1 (0.1%)

 

Both tetA, QnrS, and mefA

1 (3%)

4 (0.3%)

 
  1. *None of the isolates were positive for the AMR markers aacC1, NDM, OXA-62, IMP-1