From: Evaluation of WGS-subtyping methods for epidemiological surveillance of foodborne salmonellosis
Strain ID: | MLST: | rMLST: | cgMLST: | wgMLST: |
---|---|---|---|---|
Outbreak strains: | ||||
 902,637 | 10 | 1429 | 38,665 | 259,116 |
 MF036933 | 10 | 1429 | 38,665 | 259,117 |
 MF036980 | 10 | 1429 | 38,665 | 259,118 |
 517,138 | 10 | 1429 | 38,665 | 259,121 |
 MF6869 | 10 | 1429 | 38,665 | 259,127 |
 M26560 | 10 | 1429 | 38,665 | 259,123 |
 MF7067 | 10 | 1429 | 38,665 | 259,122 |
 MF7174 | 10 | 1429 | 38,665 | 259,128 |
 40,986 | 10 | 1429 | 38,665 | 259,126 |
Non-outbreak strains: | ||||
 MF038630 | 10 | 1429 | 38,666 | 259,131 |
 M1314220 | 10 | 26,829 | 38,664 | 259,120 |
 M54827 | 10 | 1429 | 38,667 | 259,129 |
 MB12371 | 10 | 26,829 | 38,668 | 259,130 |
 MF5994 | 10 | 92,451 | 38,669 | 259,145 |
 MB7978 | 10 | 1429 | 38,670 | 259,133 |
 B289223 | 10 | 1429 | 38,671 | 259,134 |
 11F310 | 10 | 1429 | 38,655 | 259,135 |
 MB98550 | 10 | 3696 | 38,657 | 259,142 |
 MF8409 | 10 | 1429 | 38,658 | 259,139 |
 W151R0 | 10 | 1429 | 38,659 | 259,140 |
 B261193 | 10 | 92,450 | 38,660 | 259,141 |
 MP015199F | 10 | 1429 | 38,661 | 259,148 |
Food isolates: | ||||
a2014LSAL02972 | 10 | 1429 | 230,922 | 283,421 |
a2015LSAL00258 | 10 | 96,856 | 146,469 | 283,422 |