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Table 3 Characterization of 43 nalidixic acid-resistant Escherichia coli isolates from humans, chickens, and poultry farm/market environments

From: Quinolone-resistant Escherichia coli at the interface between humans, poultry and their shared environment- a potential public health risk

Isolate number

Origin

Mutations to the QRDRs

Other mutations

gyrA

parC

parE

pmrB

ma 001

Chicken (M)

S83L

S80I

-

-

ma 003

Environment (M)

S83L

-

-

-

ma 008

Chicken (M)

S83L

-

-

V161G

ma 010

Chicken (M)

S83L

-

-

-

ma 013

Chicken (M)

S83L + D87N

S80I

S458A

-

ma 021

Environment (M)

S83L + D87N

S80I

S458A

-

ma 024

Environment (M)

S83L

S80I

-

-

ma 038

Human (M)

S83L

-

-

-

ma 055

Chicken (M)

S83L

S80I

-

-

ma 069

Human (M)

S83A

-

-

-

ma 078

Human (M)

S83L

-

-

-

ma 105

Human (F)

S83L

-

-

-

ma 120

Environment (F)

S83L

S80I

-

-

ma 121

Chicken (F)

S83L

-

-

-

ma 126

Human (F)

S83L + D87N

S80I

L416F

-

ma 138

Human (M)

S83L + D87N

S80I

-

-

ma 140

Chicken (M)

S83L + D87N

S80I + A56T

-

-

ma 143

Human (F)

S83L + D87N

S80I

-

-

ma 146

Chicken (F)

S83L + D87N

S80I + E84G

-

-

ma 182

Environment (F)

S83L + D87N

S80I

S458A

-

ma 197

Chicken (F)

S83L + D87N

A56T + S80I + E84G

-

-

ma 218

Environment (F)

S83L + D87N

S80I

-

-

ma 233

Environment (F)

S83L

S80I

-

-

ma 234

Chicken (F)

S83L + D87N

S80I

-

-

ma 236

Human (F)

S83L + D87N

S80I

S458A

-

ma 238

Chicken (F)

S83L

S80I

-

-

ma 246

Chicken (M)

S83L + D87N

S80I

-

-

ma 249

Environment (M)

S83L

-

-

-

ma 253

Environment (F)

S83L + D87N

S80I

-

-

ma 261

Human (M)

S83L + D87N

S80I

L416F

-

ma 263

Chicken (F)

S83L + D87N

S80I

L416F

-

ma 281

Chicken (F)

S83L

-

-

-

ma 282

Environment (F)

S83L

-

-

-

ma 294

Chicken (F)

S83L

-

-

-

ma 305

Chicken (F)

S83L + D87N

S80I + A56T

-

-

ma 312

Chicken (F)

S83L + D87N

S80I + A56T

-

-

ma 330

Chicken (F)

S83L + D87N

S80I

S458A

-

ma 331

Chicken (F)

S83L + D87Y

S80I

S458A

-

ma 384

Human (F)

-

A56T

-

-

ma 390

Human (F)

-

A56T

-

-

ma 392

Chicken (F)

-

S57T

I355T

-

ma 415

Human (F)

S83L + D87N

S80I

-

-

ma 420

Human (F)

-

A56T

-

-

ma 421

Human (F)

S83L

-

-

-

  1. *F – Poultry Farm; M – Poultry Market; QRDRs—quinolone-resistance determining region; Serine to Leucine at codon 83 (S83L); Aspartic acid to Asparagine at codon 87 (D87N); Serine to Alanine at codon 83 (S83A); Serine to Isoleucine at codon 80 (S80I); Alanine to Threonine at codon 56 (A56T); Serine to Threonine at codon 57 (S57T); Glutamic acid to Glycine at codon 84 (E84G); Serine to Alanine at codon 458 (S458A); Isoleucine to Threonine at codon 355 (I355T). “- “: represents the absence of mutations