Primer name | Sequence | Melting point (Tm) |
---|---|---|
(a). Cytochrome oxidase b subunit gene (Cytb) primers | ||
Cytb 109F | CCC ATC CAA CAT CTC ATC ATG ATG A | 61.3 °C |
Cytb 183F | GCC TAT TCC TAG CAA TAC ACT ACA C | 61.3 °C |
Cytb 515F | ACC CTA GTC GAA TGA ATC TGA GG | 60.6 °C |
Cytb 267R | CCG TAG TTT ACG TCT CGG CAG AT | 62.4 °C |
Cytb 540R | CCT CCT CAG ATT CAT TCG ACT AG | 60.6 °C |
Cytb 669R | CCT GTG GGG TTR TTT GAT CCT GT | 61.5 °C |
(b) Orthohantavirus primers | ||
PanHanta-F1 | ATG TAT GT [I] AGT GCW GAT GC | 53.2 °C |
PanHanta-R1 | ACC A [I] TCW GW [I] CCA TCA YC | 53.4 °C |
PanHanta-F2 | TGC WGA TGC [I] ACR AAA TGG TC | 56.9 °C |
PanHanta-R2 | GCA TCA TCW GAR TGA TG [I] GCA A | 57.5 °C |
Seo242F | GAC AGG ATT GCA GCA GGG AAG A | 62.1 °C |
Seo870R | CAT CCC TGC AAG TGC ACC TTG | 61.8 °C |
Seo326F | CAC TAA GCT ATG GGA ATA CAC TGG A | 61.3 °C |
Seo1077R | ATG AGG AAC ACA ATC ATG GCT TCA A | 59.7 °C |