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Table 1 Primers

From: Evidence of orthohantavirus and leptospira infections in small mammals in an endemic area of Gampaha district in Sri Lanka

Primer name

Sequence

Melting point (Tm)

(a). Cytochrome oxidase b subunit gene (Cytb) primers

 Cytb 109F

CCC ATC CAA CAT CTC ATC ATG ATG A

61.3 °C

 Cytb 183F

GCC TAT TCC TAG CAA TAC ACT ACA C

61.3 °C

 Cytb 515F

ACC CTA GTC GAA TGA ATC TGA GG

60.6 °C

 Cytb 267R

CCG TAG TTT ACG TCT CGG CAG AT

62.4 °C

 Cytb 540R

CCT CCT CAG ATT CAT TCG ACT AG

60.6 °C

 Cytb 669R

CCT GTG GGG TTR TTT GAT CCT GT

61.5 °C

(b) Orthohantavirus primers

 PanHanta-F1

ATG TAT GT [I] AGT GCW GAT GC

53.2 °C

 PanHanta-R1

ACC A [I] TCW GW [I] CCA TCA YC

53.4 °C

 PanHanta-F2

TGC WGA TGC [I] ACR AAA TGG TC

56.9 °C

 PanHanta-R2

GCA TCA TCW GAR TGA TG [I] GCA A

57.5 °C

 Seo242F

GAC AGG ATT GCA GCA GGG AAG A

62.1 °C

 Seo870R

CAT CCC TGC AAG TGC ACC TTG

61.8 °C

 Seo326F

CAC TAA GCT ATG GGA ATA CAC TGG A

61.3 °C

 Seo1077R

ATG AGG AAC ACA ATC ATG GCT TCA A

59.7 °C