Platform | Reference | Typing approach | Central instance/ Local instance | Commercial (C)/ Academic (A) |
---|---|---|---|---|
BIGSdb | [151] | wg/cgMLST | Both possible | A |
Bionumerics | http://www.applied-maths.com/applications/wgmlst | wg/cgMLST and SNP | Both possible | C |
CGE | [152] | cgMLST and SNP | Cloud | A |
COMPARE | [153] | cgMLST and SNP | Cloud | A |
Enterobase | [16] | wg/cgMLST and SNP | Cloud | A |
INNUENDO | [154] | wg/cgMLST | Local | A |
IRIDA | [155] | wg/cgMLST and SNP | Local | A |
NCBI Pathogens | [156] | wg/cgMLST and SNP | Cloud | A |
PathogenWatch | https://pathogen.watch | cgMLST | Cloud | A |
PATRIC | SNP | Cloud | A | |
SeqSphere+ | https://www.ridom.de/seqsphere/ | wg/cgMLST | Local | C |