Table 7 In silico analyses results of antimicrobial resistance genes and mutations within all Salmonella Dublin strains
From: Evaluation of WGS-subtyping methods for epidemiological surveillance of foodborne salmonellosis
Strain ID: | Acquired antibiotic resistance genes: | Mutations in gyrA gene: | Mutations in parC gene: |
|---|---|---|---|
Outbreak strains: | |||
902,637 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
MF036933 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
MF036980 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
517,138 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
MF6869 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
M26560 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
MF7067 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
MF7174 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
40,986 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
Non-outbreak strains: | |||
MF038630 | Aminoglycoside (aac(6′)-Iaa) | Absent | Present |
M1314220 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
M54827 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
MB12371 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
MF5994 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
MB7978 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
B289223 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
11F310 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
MB98550 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
MF8409 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
W151R0 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
B261193 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
MP015199F | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
Food strains: | |||
a2014LSAL02972 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |
a2015LSAL00258 | Aminoglycoside (aac(6′)-Iaa) | Absent | Absent |